GSE125956 SYK knockdown 3 v 5 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE125956_SYK knockdown_3_v_5_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE125956_SYK knockdown_3_v_5_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE125956_SYK knockdown_3_v_5_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE125956_SYK knockdown_3_v_5_human_dn.

Results found

Linked to

	Label	Description
	GPSM3 Gene (Entity type)	ENSG00000213654 - G protein signaling modulator 3
	PKD1P1 Gene (Entity type)	ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1
	CROCCP2 Gene (Entity type)	ENSG00000291072 - CROCC pseudogene 2
	H3-7 Gene (Entity type)	ENSG00000273213 - H3.7 histone (putative)
	DUXAP8 Gene (Entity type)	ENSG00000206195 - double homeobox A pseudogene 8
	LINC02693 Gene (Entity type)	ENSG00000212719 - long intergenic non-protein coding RNA 2693
	HERC2P2 Gene (Entity type)	ENSG00000291003 - HERC2 pseudogene 2
	CENPBD2P Gene (Entity type)	ENSG00000267858 - CENPB DNA-binding domains containing 2, pseudogene
	MIR3142HG Gene (Entity type)	ENSG00000253522 - MIR3142 host gene
	DPY19L2P2 Gene (Entity type)	ENSG00000291139 - DPY19L2 pseudogene 2

GPSM3

Gene (Entity type)

ENSG00000213654 - G protein signaling modulator 3

PKD1P1

Gene (Entity type)

ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1

CROCCP2

Gene (Entity type)

ENSG00000291072 - CROCC pseudogene 2

H3-7

Gene (Entity type)

ENSG00000273213 - H3.7 histone (putative)

DUXAP8

Gene (Entity type)

ENSG00000206195 - double homeobox A pseudogene 8

LINC02693

Gene (Entity type)

ENSG00000212719 - long intergenic non-protein coding RNA 2693

HERC2P2

Gene (Entity type)

ENSG00000291003 - HERC2 pseudogene 2

CENPBD2P

Gene (Entity type)

ENSG00000267858 - CENPB DNA-binding domains containing 2, pseudogene

MIR3142HG

Gene (Entity type)

ENSG00000253522 - MIR3142 host gene

DPY19L2P2

Gene (Entity type)

ENSG00000291139 - DPY19L2 pseudogene 2

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.