GSE125956 SYK knockdown 3 v 5 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE125956_SYK knockdown_3_v_5_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE125956_SYK knockdown_3_v_5_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE125956_SYK knockdown_3_v_5_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE125956_SYK knockdown_3_v_5_human_dn.

Results found

Linked to

	Label	Description
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	ARPC1A Gene (Entity type)	ENSG00000241685 - actin related protein 2/3 complex subunit 1A
	TNFRSF14 Gene (Entity type)	ENSG00000157873 - TNF receptor superfamily member 14
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	FANCA Gene (Entity type)	ENSG00000187741 - FA complementation group A
	SLC22A3 Gene (Entity type)	ENSG00000146477 - solute carrier family 22 member 3
	TERF2IP Gene (Entity type)	ENSG00000166848 - TERF2 interacting protein
	RPL9 Gene (Entity type)	ENSG00000163682 - ribosomal protein L9
	NCK2 Gene (Entity type)	ENSG00000071051 - NCK adaptor protein 2
	ORAI2 Gene (Entity type)	ENSG00000160991 - ORAI calcium release-activated calcium modulator 2

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

ARPC1A

Gene (Entity type)

ENSG00000241685 - actin related protein 2/3 complex subunit 1A

TNFRSF14

Gene (Entity type)

ENSG00000157873 - TNF receptor superfamily member 14

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

FANCA

Gene (Entity type)

ENSG00000187741 - FA complementation group A

SLC22A3

Gene (Entity type)

ENSG00000146477 - solute carrier family 22 member 3

TERF2IP

Gene (Entity type)

ENSG00000166848 - TERF2 interacting protein

RPL9

Gene (Entity type)

ENSG00000163682 - ribosomal protein L9

NCK2

Gene (Entity type)

ENSG00000071051 - NCK adaptor protein 2

ORAI2

Gene (Entity type)

ENSG00000160991 - ORAI calcium release-activated calcium modulator 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.