XRN1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with XRN1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with XRN1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with XRN1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with XRN1 Up.

Results found

Linked to

	Label	Description
	POLR3E Gene (Entity type)	ENSG00000058600 - RNA polymerase III subunit E
	CHD8 Gene (Entity type)	ENSG00000100888 - chromodomain helicase DNA binding protein 8
	ATF7IP Gene (Entity type)	ENSG00000171681 - activating transcription factor 7 interacting protein
	MAPK8IP3 Gene (Entity type)	ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3
	GTF3C1 Gene (Entity type)	ENSG00000077235 - general transcription factor IIIC subunit 1
	NCOR1 Gene (Entity type)	ENSG00000141027 - nuclear receptor corepressor 1
	UPF2 Gene (Entity type)	ENSG00000151461 - UPF2 regulator of nonsense mediated mRNA decay
	ARGLU1 Gene (Entity type)	ENSG00000134884 - arginine and glutamate rich 1
	MAPKBP1 Gene (Entity type)	ENSG00000137802 - mitogen-activated protein kinase binding protein 1
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

POLR3E

Gene (Entity type)

ENSG00000058600 - RNA polymerase III subunit E

CHD8

Gene (Entity type)

ENSG00000100888 - chromodomain helicase DNA binding protein 8

ATF7IP

Gene (Entity type)

ENSG00000171681 - activating transcription factor 7 interacting protein

MAPK8IP3

Gene (Entity type)

ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3

GTF3C1

Gene (Entity type)

ENSG00000077235 - general transcription factor IIIC subunit 1

NCOR1

Gene (Entity type)

ENSG00000141027 - nuclear receptor corepressor 1

UPF2

Gene (Entity type)

ENSG00000151461 - UPF2 regulator of nonsense mediated mRNA decay

ARGLU1

Gene (Entity type)

ENSG00000134884 - arginine and glutamate rich 1

MAPKBP1

Gene (Entity type)

ENSG00000137802 - mitogen-activated protein kinase binding protein 1

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.