CD3D Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CD3D Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CD3D Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CD3D Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CD3D Up.

Results found

Linked to

	Label	Description
	DFFA Gene (Entity type)	ENSG00000160049 - DNA fragmentation factor subunit alpha
	CISH Gene (Entity type)	ENSG00000114737 - cytokine inducible SH2 containing protein
	CAD Gene (Entity type)	ENSG00000084774 - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
	RBM5 Gene (Entity type)	ENSG00000003756 - RNA binding motif protein 5
	XPC Gene (Entity type)	ENSG00000154767 - XPC complex subunit, DNA damage recognition and repair factor
	NUCLEOLIN Gene (Entity type)	ENSG00000115053 - nucleolin multifunctional protein
	HNRNPUL1 Gene (Entity type)	ENSG00000105323 - heterogeneous nuclear ribonucleoprotein U like 1
	GAS2 Gene (Entity type)	ENSG00000148935 - growth arrest specific 2
	SF1 Gene (Entity type)	ENSG00000168066 - splicing factor 1
	FBXO28 Gene (Entity type)	ENSG00000143756 - F-box protein 28

DFFA

Gene (Entity type)

ENSG00000160049 - DNA fragmentation factor subunit alpha

CISH

Gene (Entity type)

ENSG00000114737 - cytokine inducible SH2 containing protein

CAD

Gene (Entity type)

ENSG00000084774 - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

RBM5

Gene (Entity type)

ENSG00000003756 - RNA binding motif protein 5

XPC

Gene (Entity type)

ENSG00000154767 - XPC complex subunit, DNA damage recognition and repair factor

NUCLEOLIN

Gene (Entity type)

ENSG00000115053 - nucleolin multifunctional protein

HNRNPUL1

Gene (Entity type)

ENSG00000105323 - heterogeneous nuclear ribonucleoprotein U like 1

GAS2

Gene (Entity type)

ENSG00000148935 - growth arrest specific 2

SF1

Gene (Entity type)

ENSG00000168066 - splicing factor 1

FBXO28

Gene (Entity type)

ENSG00000143756 - F-box protein 28

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.