B2M Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with B2M Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with B2M Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with B2M Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with B2M Up.

Results found

Linked to

	Label	Description
	DONSON Gene (Entity type)	ENSG00000159147 - DNA replication fork stabilization factor DONSON
	TRAF3 Gene (Entity type)	ENSG00000131323 - TNF receptor associated factor 3
	CALB2 Gene (Entity type)	ENSG00000172137 - calbindin 2
	SOX13 Gene (Entity type)	ENSG00000143842 - SRY-box transcription factor 13
	MMP16 Gene (Entity type)	ENSG00000156103 - matrix metallopeptidase 16
	UNC119B Gene (Entity type)	ENSG00000175970 - unc-119 lipid binding chaperone B
	ADGRL3 Gene (Entity type)	ENSG00000150471 - adhesion G protein-coupled receptor L3
	CSPG5 Gene (Entity type)	ENSG00000114646 - chondroitin sulfate proteoglycan 5
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated

DONSON

Gene (Entity type)

ENSG00000159147 - DNA replication fork stabilization factor DONSON

TRAF3

Gene (Entity type)

ENSG00000131323 - TNF receptor associated factor 3

CALB2

Gene (Entity type)

ENSG00000172137 - calbindin 2

SOX13

Gene (Entity type)

ENSG00000143842 - SRY-box transcription factor 13

MMP16

Gene (Entity type)

ENSG00000156103 - matrix metallopeptidase 16

UNC119B

Gene (Entity type)

ENSG00000175970 - unc-119 lipid binding chaperone B

ADGRL3

Gene (Entity type)

ENSG00000150471 - adhesion G protein-coupled receptor L3

CSPG5

Gene (Entity type)

ENSG00000114646 - chondroitin sulfate proteoglycan 5

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.