SMIM3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SMIM3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SMIM3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SMIM3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SMIM3 Up.

Results found

Linked to

	Label	Description
	C2 Gene (Entity type)	ENSG00000166278 - complement C2
	PLXDC1 Gene (Entity type)	ENSG00000161381 - plexin domain containing 1
	SERPINA6 Gene (Entity type)	ENSG00000170099 - serpin family A member 6
	TNK2 Gene (Entity type)	ENSG00000061938 - tyrosine kinase non receptor 2
	CLCN7 Gene (Entity type)	ENSG00000103249 - Cl-/H+ antiporter 7
	ESF1 Gene (Entity type)	ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein
	CST4 Gene (Entity type)	ENSG00000101441 - cystatin S
	MAPK8IP3 Gene (Entity type)	ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3
	TPP2 Gene (Entity type)	ENSG00000134900 - tripeptidyl peptidase 2
	ENY2 Gene (Entity type)	ENSG00000120533 - ENY2 transcription and export complex 2 subunit

Gene (Entity type)

ENSG00000166278 - complement C2

PLXDC1

Gene (Entity type)

ENSG00000161381 - plexin domain containing 1

SERPINA6

Gene (Entity type)

ENSG00000170099 - serpin family A member 6

TNK2

Gene (Entity type)

ENSG00000061938 - tyrosine kinase non receptor 2

CLCN7

Gene (Entity type)

ENSG00000103249 - Cl-/H+ antiporter 7

ESF1

Gene (Entity type)

ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein

CST4

Gene (Entity type)

ENSG00000101441 - cystatin S

MAPK8IP3

Gene (Entity type)

ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3

TPP2

Gene (Entity type)

ENSG00000134900 - tripeptidyl peptidase 2

ENY2

Gene (Entity type)

ENSG00000120533 - ENY2 transcription and export complex 2 subunit

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.