SMC3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SMC3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SMC3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SMC3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SMC3 Up.

Results found

Linked to

	Label	Description
	PHIP Gene (Entity type)	ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex
	FBXW2 Gene (Entity type)	ENSG00000119402 - F-box and WD repeat domain containing 2
	REL Gene (Entity type)	ENSG00000162924 - REL proto-oncogene, NF-kB subunit
	GHR Gene (Entity type)	ENSG00000112964 - growth hormone receptor
	RAB23 Gene (Entity type)	ENSG00000112210 - RAB23, member RAS oncogene family
	WDR19 Gene (Entity type)	ENSG00000157796 - WD repeat domain 19
	TMCC1 Gene (Entity type)	ENSG00000172765 - transmembrane and coiled-coil domain family 1
	SERF2 Gene (Entity type)	ENSG00000140264 - small EDRK-rich factor 2
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	B3GALNT1 Gene (Entity type)	ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)

PHIP

Gene (Entity type)

ENSG00000146247 - PHIP subunit of CUL4-Ring ligase complex

FBXW2

Gene (Entity type)

ENSG00000119402 - F-box and WD repeat domain containing 2

REL

Gene (Entity type)

ENSG00000162924 - REL proto-oncogene, NF-kB subunit

GHR

Gene (Entity type)

ENSG00000112964 - growth hormone receptor

RAB23

Gene (Entity type)

ENSG00000112210 - RAB23, member RAS oncogene family

WDR19

Gene (Entity type)

ENSG00000157796 - WD repeat domain 19

TMCC1

Gene (Entity type)

ENSG00000172765 - transmembrane and coiled-coil domain family 1

SERF2

Gene (Entity type)

ENSG00000140264 - small EDRK-rich factor 2

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

B3GALNT1

Gene (Entity type)

ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.