PAK3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PAK3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PAK3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PAK3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PAK3 Up.

Results found

Linked to

	Label	Description
	ZNF665 Gene (Entity type)	ENSG00000197497 - zinc finger protein 665
	TRIP12 Gene (Entity type)	ENSG00000153827 - thyroid hormone receptor interactor 12
	ATP6V0A4 Gene (Entity type)	ENSG00000105929 - ATPase H+ transporting V0 subunit a4
	EMC2 Gene (Entity type)	ENSG00000104412 - ER membrane protein complex subunit 2
	APOBEC3A Gene (Entity type)	ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7
	RAP1A Gene (Entity type)	ENSG00000116473 - RAP1A, member of RAS oncogene family
	ATF6 Gene (Entity type)	ENSG00000118217 - activating transcription factor 6
	MEF2A Gene (Entity type)	ENSG00000068305 - myocyte enhancer factor 2A
	SS18 Gene (Entity type)	ENSG00000141380 - SS18 subunit of BAF chromatin remodeling complex

ZNF665

Gene (Entity type)

ENSG00000197497 - zinc finger protein 665

TRIP12

Gene (Entity type)

ENSG00000153827 - thyroid hormone receptor interactor 12

ATP6V0A4

Gene (Entity type)

ENSG00000105929 - ATPase H+ transporting V0 subunit a4

EMC2

Gene (Entity type)

ENSG00000104412 - ER membrane protein complex subunit 2

APOBEC3A

Gene (Entity type)

ENSG00000128383 - apolipoprotein B mRNA editing enzyme catalytic subunit 3A

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

RAP1A

Gene (Entity type)

ENSG00000116473 - RAP1A, member of RAS oncogene family

ATF6

Gene (Entity type)

ENSG00000118217 - activating transcription factor 6

MEF2A

Gene (Entity type)

ENSG00000068305 - myocyte enhancer factor 2A

SS18

Gene (Entity type)

ENSG00000141380 - SS18 subunit of BAF chromatin remodeling complex

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.