DPM3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with DPM3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with DPM3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with DPM3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with DPM3 Down.

Results found

Linked to

	Label	Description
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	CDR2 Gene (Entity type)	ENSG00000140743 - cerebellar degeneration related protein 2
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	SLC7A6 Gene (Entity type)	ENSG00000103064 - solute carrier family 7 member 6
	CHD1 Gene (Entity type)	ENSG00000153922 - chromodomain helicase DNA binding protein 1
	VWA8 Gene (Entity type)	ENSG00000102763 - von Willebrand factor A domain containing 8
	COX4I1 Gene (Entity type)	ENSG00000131143 - cytochrome c oxidase subunit 4I1
	HMBOX1 Gene (Entity type)	ENSG00000147421 - homeobox containing 1
	PTPN2 Gene (Entity type)	ENSG00000175354 - protein tyrosine phosphatase non-receptor type 2
	KLHDC8A Gene (Entity type)	ENSG00000162873 - kelch domain containing 8A

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

CDR2

Gene (Entity type)

ENSG00000140743 - cerebellar degeneration related protein 2

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

SLC7A6

Gene (Entity type)

ENSG00000103064 - solute carrier family 7 member 6

CHD1

Gene (Entity type)

ENSG00000153922 - chromodomain helicase DNA binding protein 1

VWA8

Gene (Entity type)

ENSG00000102763 - von Willebrand factor A domain containing 8

COX4I1

Gene (Entity type)

ENSG00000131143 - cytochrome c oxidase subunit 4I1

HMBOX1

Gene (Entity type)

ENSG00000147421 - homeobox containing 1

PTPN2

Gene (Entity type)

ENSG00000175354 - protein tyrosine phosphatase non-receptor type 2

KLHDC8A

Gene (Entity type)

ENSG00000162873 - kelch domain containing 8A

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.