HK3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HK3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HK3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HK3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HK3 Down.

Results found

Linked to

	Label	Description
	NRXN3 Gene (Entity type)	ENSG00000021645 - neurexin 3
	GRSF1 Gene (Entity type)	ENSG00000132463 - G-rich RNA sequence binding factor 1
	CASQ2 Gene (Entity type)	ENSG00000118729 - calsequestrin 2
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f
	STX18 Gene (Entity type)	ENSG00000168818 - syntaxin 18
	RSRC2 Gene (Entity type)	ENSG00000111011 - arginine and serine rich coiled-coil 2
	SOX13 Gene (Entity type)	ENSG00000143842 - SRY-box transcription factor 13
	SLC35E3 Gene (Entity type)	ENSG00000175782 - solute carrier family 35 member E3
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	PIK3C3 Gene (Entity type)	ENSG00000078142 - phosphatidylinositol 3-kinase catalytic subunit type 3

NRXN3

Gene (Entity type)

ENSG00000021645 - neurexin 3

GRSF1

Gene (Entity type)

ENSG00000132463 - G-rich RNA sequence binding factor 1

CASQ2

Gene (Entity type)

ENSG00000118729 - calsequestrin 2

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

STX18

Gene (Entity type)

ENSG00000168818 - syntaxin 18

RSRC2

Gene (Entity type)

ENSG00000111011 - arginine and serine rich coiled-coil 2

SOX13

Gene (Entity type)

ENSG00000143842 - SRY-box transcription factor 13

SLC35E3

Gene (Entity type)

ENSG00000175782 - solute carrier family 35 member E3

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

PIK3C3

Gene (Entity type)

ENSG00000078142 - phosphatidylinositol 3-kinase catalytic subunit type 3

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.