SCCPDH Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SCCPDH Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SCCPDH Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SCCPDH Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SCCPDH Up.

Results found

Linked to

	Label	Description
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	NCK2 Gene (Entity type)	ENSG00000071051 - NCK adaptor protein 2
	HPN Gene (Entity type)	ENSG00000105707 - hepsin
	TNK2 Gene (Entity type)	ENSG00000061938 - tyrosine kinase non receptor 2
	RETREG2 Gene (Entity type)	ENSG00000144567 - reticulophagy regulator family member 2
	KLC1 Gene (Entity type)	ENSG00000126214 - kinesin light chain 1
	UPF3A Gene (Entity type)	ENSG00000169062 - UPF3A regulator of nonsense mediated mRNA decay
	MGRN1 Gene (Entity type)	ENSG00000102858 - mahogunin ring finger 1
	RAD9A Gene (Entity type)	ENSG00000172613 - RAD9 checkpoint clamp component A
	TULP3 Gene (Entity type)	ENSG00000078246 - TUB like protein 3

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

NCK2

Gene (Entity type)

ENSG00000071051 - NCK adaptor protein 2

HPN

Gene (Entity type)

ENSG00000105707 - hepsin

TNK2

Gene (Entity type)

ENSG00000061938 - tyrosine kinase non receptor 2

RETREG2

Gene (Entity type)

ENSG00000144567 - reticulophagy regulator family member 2

KLC1

Gene (Entity type)

ENSG00000126214 - kinesin light chain 1

UPF3A

Gene (Entity type)

ENSG00000169062 - UPF3A regulator of nonsense mediated mRNA decay

MGRN1

Gene (Entity type)

ENSG00000102858 - mahogunin ring finger 1

RAD9A

Gene (Entity type)

ENSG00000172613 - RAD9 checkpoint clamp component A

TULP3

Gene (Entity type)

ENSG00000078246 - TUB like protein 3

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.