GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 6 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_up.

Results found

Linked to

	Label	Description
	RGL2 Gene (Entity type)	ENSG00000237441 - ral guanine nucleotide dissociation stimulator like 2
	GPSM3 Gene (Entity type)	ENSG00000213654 - G protein signaling modulator 3
	SYNRG Gene (Entity type)	ENSG00000275066 - synergin gamma
	AKAP17A Gene (Entity type)	ENSG00000292343 - A-kinase anchoring protein 17A
	PVT1 Gene (Entity type)	ENSG00000249859 - Pvt1 oncogene
	NORAD Gene (Entity type)	ENSG00000260032 - non-coding RNA activated by DNA damage
	FRG1CP Gene (Entity type)	ENSG00000282826 - FSHD region gene 1 family member C, pseudogene
	LINC00294 Gene (Entity type)	ENSG00000280798 - long intergenic non-protein coding RNA 294
	MANCR Gene (Entity type)	ENSG00000231298 - mitotically associated long non coding RNA
	HOXA11-AS Gene (Entity type)	ENSG00000240990 - HOXA11 antisense RNA

RGL2

Gene (Entity type)

ENSG00000237441 - ral guanine nucleotide dissociation stimulator like 2

GPSM3

Gene (Entity type)

ENSG00000213654 - G protein signaling modulator 3

SYNRG

Gene (Entity type)

ENSG00000275066 - synergin gamma

AKAP17A

Gene (Entity type)

ENSG00000292343 - A-kinase anchoring protein 17A

PVT1

Gene (Entity type)

ENSG00000249859 - Pvt1 oncogene

NORAD

Gene (Entity type)

ENSG00000260032 - non-coding RNA activated by DNA damage

FRG1CP

Gene (Entity type)

ENSG00000282826 - FSHD region gene 1 family member C, pseudogene

LINC00294

Gene (Entity type)

ENSG00000280798 - long intergenic non-protein coding RNA 294

MANCR

Gene (Entity type)

ENSG00000231298 - mitotically associated long non coding RNA

HOXA11-AS

Gene (Entity type)

ENSG00000240990 - HOXA11 antisense RNA

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.