GSE238116 EGR1 HCC overexpression MHCC97-H PLC-PRF-5 3 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE238116_EGR1_HCC overexpression_MHCC97-H_PLC-PRF-5_3_v_2_human_up.

Results found

Linked to

	Label	Description
	H19 Gene (Entity type)	ENSG00000130600 - H19 imprinted maternally expressed transcript
	TRIM16L Gene (Entity type)	ENSG00000291110 - tripartite motif containing 16 like (pseudogene)
	PAX8-AS1 Gene (Entity type)	ENSG00000189223 - PAX8 antisense RNA 1
	LINC00511 Gene (Entity type)	ENSG00000227036 - long intergenic non-protein coding RNA 511
	HAGLR Gene (Entity type)	ENSG00000224189 - HOXD antisense growth-associated long non-coding RNA
	PRKY Gene (Entity type)	ENSG00000293442 - protein kinase Y-linked (pseudogene)
	MIR34AHG Gene (Entity type)	ENSG00000228526 - MIR34A host gene
	LOXL1-AS1 Gene (Entity type)	ENSG00000261801 - LOXL1 antisense RNA 1
	H2BC20P Gene (Entity type)	ENSG00000261716 - H2B clustered histone 20, pseudogene
	LOC645485 Gene (Entity type)	ENSG00000285517 - uncharacterized LOC645485

H19

Gene (Entity type)

ENSG00000130600 - H19 imprinted maternally expressed transcript

TRIM16L

Gene (Entity type)

ENSG00000291110 - tripartite motif containing 16 like (pseudogene)

PAX8-AS1

Gene (Entity type)

ENSG00000189223 - PAX8 antisense RNA 1

LINC00511

Gene (Entity type)

ENSG00000227036 - long intergenic non-protein coding RNA 511

HAGLR

Gene (Entity type)

ENSG00000224189 - HOXD antisense growth-associated long non-coding RNA

PRKY

Gene (Entity type)

ENSG00000293442 - protein kinase Y-linked (pseudogene)

MIR34AHG

Gene (Entity type)

ENSG00000228526 - MIR34A host gene

LOXL1-AS1

Gene (Entity type)

ENSG00000261801 - LOXL1 antisense RNA 1

H2BC20P

Gene (Entity type)

ENSG00000261716 - H2B clustered histone 20, pseudogene

LOC645485

Gene (Entity type)

ENSG00000285517 - uncharacterized LOC645485

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.