MX2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MX2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MX2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MX2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MX2 Up.

Results found

Linked to

	Label	Description
	NR1H3 Gene (Entity type)	ENSG00000025434 - nuclear receptor subfamily 1 group H member 3
	RUFY2 Gene (Entity type)	ENSG00000204130 - RUN and FYVE domain containing 2
	PSMA3 Gene (Entity type)	ENSG00000100567 - proteasome 20S subunit alpha 3
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7
	RAPGEF4 Gene (Entity type)	ENSG00000091428 - Rap guanine nucleotide exchange factor 4
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	CLIP1 Gene (Entity type)	ENSG00000130779 - CAP-Gly domain containing linker protein 1
	DKK2 Gene (Entity type)	ENSG00000155011 - dickkopf Wnt signaling pathway inhibitor 2
	ABCF2 Gene (Entity type)	ENSG00000033050 - ATP binding cassette subfamily F member 2
	DICER1 Gene (Entity type)	ENSG00000100697 - dicer 1, ribonuclease III

NR1H3

Gene (Entity type)

ENSG00000025434 - nuclear receptor subfamily 1 group H member 3

RUFY2

Gene (Entity type)

ENSG00000204130 - RUN and FYVE domain containing 2

PSMA3

Gene (Entity type)

ENSG00000100567 - proteasome 20S subunit alpha 3

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

RAPGEF4

Gene (Entity type)

ENSG00000091428 - Rap guanine nucleotide exchange factor 4

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

CLIP1

Gene (Entity type)

ENSG00000130779 - CAP-Gly domain containing linker protein 1

DKK2

Gene (Entity type)

ENSG00000155011 - dickkopf Wnt signaling pathway inhibitor 2

ABCF2

Gene (Entity type)

ENSG00000033050 - ATP binding cassette subfamily F member 2

DICER1

Gene (Entity type)

ENSG00000100697 - dicer 1, ribonuclease III

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.