STC1 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with STC1 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with STC1 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with STC1 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with STC1 Down.

Results found

Linked to

	Label	Description
	PAFAH1B3 Gene (Entity type)	ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	CTR9 Gene (Entity type)	ENSG00000198730 - CTR9 component of Paf1/RNA polymerase II complex
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	BATF3 Gene (Entity type)	ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3
	TMED2 Gene (Entity type)	ENSG00000086598 - transmembrane p24 trafficking protein 2
	SUOX Gene (Entity type)	ENSG00000139531 - sulfite oxidase
	TRIM5 Gene (Entity type)	ENSG00000132256 - tripartite motif containing 5
	SPAG4 Gene (Entity type)	ENSG00000061656 - sperm associated antigen 4

PAFAH1B3

Gene (Entity type)

ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

CTR9

Gene (Entity type)

ENSG00000198730 - CTR9 component of Paf1/RNA polymerase II complex

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

BATF3

Gene (Entity type)

ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3

TMED2

Gene (Entity type)

ENSG00000086598 - transmembrane p24 trafficking protein 2

SUOX

Gene (Entity type)

ENSG00000139531 - sulfite oxidase

TRIM5

Gene (Entity type)

ENSG00000132256 - tripartite motif containing 5

SPAG4

Gene (Entity type)

ENSG00000061656 - sperm associated antigen 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.