RFK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RFK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RFK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RFK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RFK Down.

Results found

Linked to

	Label	Description
	CTNND2 Gene (Entity type)	ENSG00000169862 - catenin delta 2
	BCL2L2 Gene (Entity type)	ENSG00000129473 - BCL2 like 2
	CLTA Gene (Entity type)	ENSG00000122705 - clathrin light chain A
	EMC7 Gene (Entity type)	ENSG00000134153 - ER membrane protein complex subunit 7
	ZNF536 Gene (Entity type)	ENSG00000198597 - zinc finger protein 536
	SNAP29 Gene (Entity type)	ENSG00000099940 - synaptosome associated protein 29
	STX4 Gene (Entity type)	ENSG00000103496 - syntaxin 4
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	ATP5ME Gene (Entity type)	ENSG00000169020 - ATP synthase membrane subunit e

CTNND2

Gene (Entity type)

ENSG00000169862 - catenin delta 2

BCL2L2

Gene (Entity type)

ENSG00000129473 - BCL2 like 2

CLTA

Gene (Entity type)

ENSG00000122705 - clathrin light chain A

EMC7

Gene (Entity type)

ENSG00000134153 - ER membrane protein complex subunit 7

ZNF536

Gene (Entity type)

ENSG00000198597 - zinc finger protein 536

SNAP29

Gene (Entity type)

ENSG00000099940 - synaptosome associated protein 29

STX4

Gene (Entity type)

ENSG00000103496 - syntaxin 4

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

ATP5ME

Gene (Entity type)

ENSG00000169020 - ATP synthase membrane subunit e

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.