HGFAC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HGFAC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HGFAC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HGFAC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HGFAC Up.

Results found

Linked to

	Label	Description
	CASQ2 Gene (Entity type)	ENSG00000118729 - calsequestrin 2
	TRIM58 Gene (Entity type)	ENSG00000162722 - tripartite motif containing 58
	DCUN1D1 Gene (Entity type)	ENSG00000043093 - defective in cullin neddylation 1 domain containing 1
	LYRM2 Gene (Entity type)	ENSG00000083099 - LYR motif containing 2
	HMBOX1 Gene (Entity type)	ENSG00000147421 - homeobox containing 1
	BFAR Gene (Entity type)	ENSG00000103429 - bifunctional apoptosis regulator
	TAP2 Gene (Entity type)	ENSG00000204267 - transporter 2, ATP binding cassette subfamily B member
	MED6 Gene (Entity type)	ENSG00000133997 - mediator complex subunit 6
	SCNN1B Gene (Entity type)	ENSG00000168447 - sodium channel epithelial 1 subunit beta
	YIPF6 Gene (Entity type)	ENSG00000181704 - Yip1 domain family member 6

CASQ2

Gene (Entity type)

ENSG00000118729 - calsequestrin 2

TRIM58

Gene (Entity type)

ENSG00000162722 - tripartite motif containing 58

DCUN1D1

Gene (Entity type)

ENSG00000043093 - defective in cullin neddylation 1 domain containing 1

LYRM2

Gene (Entity type)

ENSG00000083099 - LYR motif containing 2

HMBOX1

Gene (Entity type)

ENSG00000147421 - homeobox containing 1

BFAR

Gene (Entity type)

ENSG00000103429 - bifunctional apoptosis regulator

TAP2

Gene (Entity type)

ENSG00000204267 - transporter 2, ATP binding cassette subfamily B member

MED6

Gene (Entity type)

ENSG00000133997 - mediator complex subunit 6

SCNN1B

Gene (Entity type)

ENSG00000168447 - sodium channel epithelial 1 subunit beta

YIPF6

Gene (Entity type)

ENSG00000181704 - Yip1 domain family member 6

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.