RAG2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RAG2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RAG2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RAG2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RAG2 Up.

Results found

Linked to

	Label	Description
	MTMR1 Gene (Entity type)	ENSG00000063601 - myotubularin related protein 1
	MAPK8IP3 Gene (Entity type)	ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3
	GOLGA4 Gene (Entity type)	ENSG00000144674 - golgin A4
	ARGLU1 Gene (Entity type)	ENSG00000134884 - arginine and glutamate rich 1
	TNK2 Gene (Entity type)	ENSG00000061938 - tyrosine kinase non receptor 2
	EDRF1 Gene (Entity type)	ENSG00000107938 - erythroid differentiation regulatory factor 1
	UPF3A Gene (Entity type)	ENSG00000169062 - UPF3A regulator of nonsense mediated mRNA decay
	SLK Gene (Entity type)	ENSG00000065613 - STE20 like kinase
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	LRPAP1 Gene (Entity type)	ENSG00000163956 - LDL receptor related protein associated protein 1

MTMR1

Gene (Entity type)

ENSG00000063601 - myotubularin related protein 1

MAPK8IP3

Gene (Entity type)

ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3

GOLGA4

Gene (Entity type)

ENSG00000144674 - golgin A4

ARGLU1

Gene (Entity type)

ENSG00000134884 - arginine and glutamate rich 1

TNK2

Gene (Entity type)

ENSG00000061938 - tyrosine kinase non receptor 2

EDRF1

Gene (Entity type)

ENSG00000107938 - erythroid differentiation regulatory factor 1

UPF3A

Gene (Entity type)

ENSG00000169062 - UPF3A regulator of nonsense mediated mRNA decay

SLK

Gene (Entity type)

ENSG00000065613 - STE20 like kinase

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

LRPAP1

Gene (Entity type)

ENSG00000163956 - LDL receptor related protein associated protein 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.