L1000-PCCSE (Project)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Child Project:

LINCS Proteomics

Project (Entity type)

Description:The LINCS PCCSE uses two high-throughput liquid chromatography-mass spectrometry (LCMS) assays to study the proteomic changes induced by drug and genetic perturbations. The L1000 high-throughput gene-expression assay closely complements these assays. The files available here contain L1000 data for 90 small-molecule perturbations in six cell lines (five cancer cell lines and a neurodevelopmental cell model).

Abbreviation:L1000PCCSE

Results found

Linked to

	Label	Description
	L1000 LINCS DCIC LPROT005 A549 6H X1 B29 verteporfin 5.00um.tsv.gz File (Entity type)	A 271 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT001 A375 6H X1 B20 sirolimus 1.00um.tsv.gz File (Entity type)	A 273 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT002 NPC.TAK 6H X1 B22 compound e 0.10um.tsv.gz File (Entity type)	A 273 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT001 PC3 6H X1 B20 EX-527 10.00um.tsv.gz File (Entity type)	A 272 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT003 NPC 6H X1.A2 B22 selumetinib 5.50um.tsv.gz File (Entity type)	A 273 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT001 PC3 6H X1 B20 GSK-J4 5.00um.tsv.gz File (Entity type)	A 272 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT003 PC3 6H X1.A2 B22 bafilomycin a1 0.05um Biosample (Entity type)	A biosample from LINCS produced as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT004 MCF7 6H X1 B32 IPI-145 0.50um.tsv.gz File (Entity type)	A 272 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT001 PC3 6H X1 B20 JQ1-(+) 1.00um Biosample (Entity type)	A biosample from LINCS produced as part of the L1000 PCCSE project
	L1000 LINCS DCIC LPROT004 YAPC 6H X1 B32 pravastatin 0.75um Biosample (Entity type)	A biosample from LINCS produced as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT005 A549 6H X1 B29 verteporfin 5.00um.tsv.gz

File (Entity type)

A 271 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT001 A375 6H X1 B20 sirolimus 1.00um.tsv.gz

File (Entity type)

A 273 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT002 NPC.TAK 6H X1 B22 compound e 0.10um.tsv.gz

File (Entity type)

A 273 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT001 PC3 6H X1 B20 EX-527 10.00um.tsv.gz

File (Entity type)

A 272 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT003 NPC 6H X1.A2 B22 selumetinib 5.50um.tsv.gz

File (Entity type)

A 273 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT001 PC3 6H X1 B20 GSK-J4 5.00um.tsv.gz

File (Entity type)

A 272 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT003 PC3 6H X1.A2 B22 bafilomycin a1 0.05um

Biosample (Entity type)

A biosample from LINCS produced as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT004 MCF7 6H X1 B32 IPI-145 0.50um.tsv.gz

File (Entity type)

A 272 KB file from LINCS produced from OBI:0002965 as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT001 PC3 6H X1 B20 JQ1-(+) 1.00um

Biosample (Entity type)

A biosample from LINCS produced as part of the L1000 PCCSE project

L1000 LINCS DCIC LPROT004 YAPC 6H X1 B32 pravastatin 0.75um

Biosample (Entity type)

A biosample from LINCS produced as part of the L1000 PCCSE project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.