CHUK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CHUK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CHUK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CHUK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CHUK Down.

Results found

Linked to

	Label	Description
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	CA3 Gene (Entity type)	ENSG00000164879 - carbonic anhydrase 3
	FAM169A Gene (Entity type)	ENSG00000198780 - family with sequence similarity 169 member A
	CSPG5 Gene (Entity type)	ENSG00000114646 - chondroitin sulfate proteoglycan 5
	IL20RA Gene (Entity type)	ENSG00000016402 - interleukin 20 receptor subunit alpha
	UGT2B4 Gene (Entity type)	ENSG00000156096 - UDP glucuronosyltransferase family 2 member B4
	DKK2 Gene (Entity type)	ENSG00000155011 - dickkopf Wnt signaling pathway inhibitor 2
	PRKACA Gene (Entity type)	ENSG00000072062 - protein kinase cAMP-activated catalytic subunit alpha
	ACYP2 Gene (Entity type)	ENSG00000170634 - acylphosphatase 2

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

CA3

Gene (Entity type)

ENSG00000164879 - carbonic anhydrase 3

FAM169A

Gene (Entity type)

ENSG00000198780 - family with sequence similarity 169 member A

CSPG5

Gene (Entity type)

ENSG00000114646 - chondroitin sulfate proteoglycan 5

IL20RA

Gene (Entity type)

ENSG00000016402 - interleukin 20 receptor subunit alpha

UGT2B4

Gene (Entity type)

ENSG00000156096 - UDP glucuronosyltransferase family 2 member B4

DKK2

Gene (Entity type)

ENSG00000155011 - dickkopf Wnt signaling pathway inhibitor 2

PRKACA

Gene (Entity type)

ENSG00000072062 - protein kinase cAMP-activated catalytic subunit alpha

ACYP2

Gene (Entity type)

ENSG00000170634 - acylphosphatase 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.