GSE173116 GSE173118 ML-7 4 v 0 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE173116_GSE173118_ML-7_4_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE173116_GSE173118_ML-7_4_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE173116_GSE173118_ML-7_4_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE173116_GSE173118_ML-7_4_v_0_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	GRB2 Gene (Entity type)	ENSG00000177885 - growth factor receptor bound protein 2
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	ADCY3 Gene (Entity type)	ENSG00000138031 - adenylate cyclase 3
	UQCR11 Gene (Entity type)	ENSG00000127540 - ubiquinol-cytochrome c reductase, complex III subunit XI
	HCK Gene (Entity type)	ENSG00000101336 - HCK proto-oncogene, Src family tyrosine kinase
	EGLN1 Gene (Entity type)	ENSG00000135766 - egl-9 family hypoxia inducible factor 1

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

GRB2

Gene (Entity type)

ENSG00000177885 - growth factor receptor bound protein 2

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

ADCY3

Gene (Entity type)

ENSG00000138031 - adenylate cyclase 3

UQCR11

Gene (Entity type)

ENSG00000127540 - ubiquinol-cytochrome c reductase, complex III subunit XI

HCK

Gene (Entity type)

ENSG00000101336 - HCK proto-oncogene, Src family tyrosine kinase

EGLN1

Gene (Entity type)

ENSG00000135766 - egl-9 family hypoxia inducible factor 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.