MT1M Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MT1M Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MT1M Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MT1M Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MT1M Up.

Results found

Linked to

	Label	Description
	NARF Gene (Entity type)	ENSG00000141562 - nuclear prelamin A recognition factor
	IRF3 Gene (Entity type)	ENSG00000126456 - interferon regulatory factor 3
	BAP1 Gene (Entity type)	ENSG00000163930 - BRCA1 associated deubiquitinase 1
	TJP3 Gene (Entity type)	ENSG00000105289 - tight junction protein 3
	C2 Gene (Entity type)	ENSG00000166278 - complement C2
	VNN2 Gene (Entity type)	ENSG00000112303 - vanin 2
	TTLL4 Gene (Entity type)	ENSG00000135912 - tubulin tyrosine ligase like 4
	LIMD2 Gene (Entity type)	ENSG00000136490 - LIM domain containing 2
	CYTH2 Gene (Entity type)	ENSG00000105443 - cytohesin 2
	CSNK2A1 Gene (Entity type)	ENSG00000101266 - casein kinase 2 alpha 1

NARF

Gene (Entity type)

ENSG00000141562 - nuclear prelamin A recognition factor

IRF3

Gene (Entity type)

ENSG00000126456 - interferon regulatory factor 3

BAP1

Gene (Entity type)

ENSG00000163930 - BRCA1 associated deubiquitinase 1

TJP3

Gene (Entity type)

ENSG00000105289 - tight junction protein 3

Gene (Entity type)

ENSG00000166278 - complement C2

VNN2

Gene (Entity type)

ENSG00000112303 - vanin 2

TTLL4

Gene (Entity type)

ENSG00000135912 - tubulin tyrosine ligase like 4

LIMD2

Gene (Entity type)

ENSG00000136490 - LIM domain containing 2

CYTH2

Gene (Entity type)

ENSG00000105443 - cytohesin 2

CSNK2A1

Gene (Entity type)

ENSG00000101266 - casein kinase 2 alpha 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.