GSE218378 PBX1 overexpression HCT 116 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE218378_PBX1 overexpression_HCT 116_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE218378_PBX1 overexpression_HCT 116_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE218378_PBX1 overexpression_HCT 116_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE218378_PBX1 overexpression_HCT 116_1_v_0_human_up.

Results found

Linked to

	Label	Description
	GAS5 Gene (Entity type)	growth arrest specific 5
	SNHG29 Gene (Entity type)	small nucleolar RNA host gene 29
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	NORAD Gene (Entity type)	non-coding RNA activated by DNA damage
	OIP5-AS1 Gene (Entity type)	OIP5 antisense RNA 1
	ZFAS1 Gene (Entity type)	ZNFX1 antisense RNA 1
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	CASTOR3P Gene (Entity type)	CASTOR family member 3, pseudogene
	BAIAP2-DT Gene (Entity type)	BAIAP2 divergent transcript
	HERC2P2 Gene (Entity type)	HERC2 pseudogene 2

GAS5

Gene (Entity type)

growth arrest specific 5

SNHG29

Gene (Entity type)

small nucleolar RNA host gene 29

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

NORAD

Gene (Entity type)

non-coding RNA activated by DNA damage

OIP5-AS1

Gene (Entity type)

OIP5 antisense RNA 1

ZFAS1

Gene (Entity type)

ZNFX1 antisense RNA 1

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

CASTOR3P

Gene (Entity type)

CASTOR family member 3, pseudogene

BAIAP2-DT

Gene (Entity type)

BAIAP2 divergent transcript

HERC2P2

Gene (Entity type)

HERC2 pseudogene 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.