GSE130521 hydroxyl 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE130521_hydroxyl_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE130521_hydroxyl_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE130521_hydroxyl_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE130521_hydroxyl_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	HS3ST3A1 Gene (Entity type)	ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1
	OGFOD1 Gene (Entity type)	ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1
	CDR2 Gene (Entity type)	ENSG00000140743 - cerebellar degeneration related protein 2
	RPL5 Gene (Entity type)	ENSG00000122406 - ribosomal protein L5
	DONSON Gene (Entity type)	ENSG00000159147 - DNA replication fork stabilization factor DONSON
	RARA Gene (Entity type)	ENSG00000131759 - retinoic acid receptor alpha
	RPL9 Gene (Entity type)	ENSG00000163682 - ribosomal protein L9
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

HS3ST3A1

Gene (Entity type)

ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1

OGFOD1

Gene (Entity type)

ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

CDR2

Gene (Entity type)

ENSG00000140743 - cerebellar degeneration related protein 2

RPL5

Gene (Entity type)

ENSG00000122406 - ribosomal protein L5

DONSON

Gene (Entity type)

ENSG00000159147 - DNA replication fork stabilization factor DONSON

RARA

Gene (Entity type)

ENSG00000131759 - retinoic acid receptor alpha

RPL9

Gene (Entity type)

ENSG00000163682 - ribosomal protein L9

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.