GSE133927 PTEN p53 Meox1 knockdown BT-549 RNA Small Interfering 1 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_dn.

Results found

Linked to

	Label	Description
	RGL2 Gene (Entity type)	ENSG00000237441 - ral guanine nucleotide dissociation stimulator like 2
	HCP5 Gene (Entity type)	ENSG00000206337 - HLA complex P5
	LINC00665 Gene (Entity type)	ENSG00000232677 - long intergenic non-protein coding RNA 665
	CASTOR3P Gene (Entity type)	ENSG00000291122 - CASTOR family member 3, pseudogene
	LINC00511 Gene (Entity type)	ENSG00000227036 - long intergenic non-protein coding RNA 511
	CUTALP Gene (Entity type)	ENSG00000293514 - cutA divalent cation tolerance like, pseudogene
	BAIAP2-DT Gene (Entity type)	ENSG00000226137 - BAIAP2 divergent transcript
	MIR1915HG Gene (Entity type)	ENSG00000204682 - MIR1915 host gene
	CRNDE Gene (Entity type)	ENSG00000245694 - colorectal neoplasia differentially expressed
	LINC03040 Gene (Entity type)	ENSG00000181577 - long intergenic non-protein coding RNA 3040

RGL2

Gene (Entity type)

ENSG00000237441 - ral guanine nucleotide dissociation stimulator like 2

HCP5

Gene (Entity type)

ENSG00000206337 - HLA complex P5

LINC00665

Gene (Entity type)

ENSG00000232677 - long intergenic non-protein coding RNA 665

CASTOR3P

Gene (Entity type)

ENSG00000291122 - CASTOR family member 3, pseudogene

LINC00511

Gene (Entity type)

ENSG00000227036 - long intergenic non-protein coding RNA 511

CUTALP

Gene (Entity type)

ENSG00000293514 - cutA divalent cation tolerance like, pseudogene

BAIAP2-DT

Gene (Entity type)

ENSG00000226137 - BAIAP2 divergent transcript

MIR1915HG

Gene (Entity type)

ENSG00000204682 - MIR1915 host gene

CRNDE

Gene (Entity type)

ENSG00000245694 - colorectal neoplasia differentially expressed

LINC03040

Gene (Entity type)

ENSG00000181577 - long intergenic non-protein coding RNA 3040

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.