ITM2C Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ITM2C Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ITM2C Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ITM2C Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ITM2C Up.

Results found

Linked to

	Label	Description
	COQ2 Gene (Entity type)	ENSG00000173085 - coenzyme Q2, polyprenyltransferase
	MMRN1 Gene (Entity type)	ENSG00000138722 - multimerin 1
	MED28 Gene (Entity type)	ENSG00000118579 - mediator complex subunit 28
	POLD3 Gene (Entity type)	ENSG00000077514 - DNA polymerase delta 3, accessory subunit
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9
	NUP160 Gene (Entity type)	ENSG00000030066 - nucleoporin 160
	ATF1 Gene (Entity type)	ENSG00000123268 - activating transcription factor 1
	PLAGL2 Gene (Entity type)	ENSG00000126003 - PLAG1 like zinc finger 2
	CBR4 Gene (Entity type)	ENSG00000145439 - carbonyl reductase 4
	FBXO3 Gene (Entity type)	ENSG00000110429 - F-box protein 3

COQ2

Gene (Entity type)

ENSG00000173085 - coenzyme Q2, polyprenyltransferase

MMRN1

Gene (Entity type)

ENSG00000138722 - multimerin 1

MED28

Gene (Entity type)

ENSG00000118579 - mediator complex subunit 28

POLD3

Gene (Entity type)

ENSG00000077514 - DNA polymerase delta 3, accessory subunit

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

NUP160

Gene (Entity type)

ENSG00000030066 - nucleoporin 160

ATF1

Gene (Entity type)

ENSG00000123268 - activating transcription factor 1

PLAGL2

Gene (Entity type)

ENSG00000126003 - PLAG1 like zinc finger 2

CBR4

Gene (Entity type)

ENSG00000145439 - carbonyl reductase 4

FBXO3

Gene (Entity type)

ENSG00000110429 - F-box protein 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.