GSE140646 BATF3 knockdown TL-Om1 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE140646_BATF3 knockdown_TL-Om1_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE140646_BATF3 knockdown_TL-Om1_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE140646_BATF3 knockdown_TL-Om1_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE140646_BATF3 knockdown_TL-Om1_0_v_1_human_up.

Results found

Linked to

	Label	Description
	PIK3CB Gene (Entity type)	ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	HLA-DMA Gene (Entity type)	ENSG00000204257 - major histocompatibility complex, class II, DM alpha
	EGLN1 Gene (Entity type)	ENSG00000135766 - egl-9 family hypoxia inducible factor 1
	PPP2R5C Gene (Entity type)	ENSG00000078304 - protein phosphatase 2 regulatory subunit B'gamma
	ARF6 Gene (Entity type)	ENSG00000165527 - ARF GTPase 6
	PSEN1 Gene (Entity type)	ENSG00000080815 - presenilin 1

PIK3CB

Gene (Entity type)

ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

CAT

Gene (Entity type)

ENSG00000121691 - catalase

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

HLA-DMA

Gene (Entity type)

ENSG00000204257 - major histocompatibility complex, class II, DM alpha

EGLN1

Gene (Entity type)

ENSG00000135766 - egl-9 family hypoxia inducible factor 1

PPP2R5C

Gene (Entity type)

ENSG00000078304 - protein phosphatase 2 regulatory subunit B'gamma

ARF6

Gene (Entity type)

ENSG00000165527 - ARF GTPase 6

PSEN1

Gene (Entity type)

ENSG00000080815 - presenilin 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.