PTPA Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPA Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPA Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPA Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPA Down.

Results found

Linked to

	Label	Description
	IGSF6 Gene (Entity type)	ENSG00000140749 - immunoglobulin superfamily member 6
	LDLRAP1 Gene (Entity type)	ENSG00000157978 - low density lipoprotein receptor adaptor protein 1
	PHC1 Gene (Entity type)	ENSG00000111752 - polyhomeotic homolog 1
	ZMYM3 Gene (Entity type)	ENSG00000147130 - zinc finger MYM-type containing 3
	PRKAG1 Gene (Entity type)	ENSG00000181929 - protein kinase AMP-activated non-catalytic subunit gamma 1
	DMTN Gene (Entity type)	ENSG00000158856 - dematin actin binding protein
	ELP5 Gene (Entity type)	ENSG00000170291 - elongator acetyltransferase complex subunit 5
	TRIM58 Gene (Entity type)	ENSG00000162722 - tripartite motif containing 58
	TIE1 Gene (Entity type)	ENSG00000066056 - tyrosine kinase with immunoglobulin like and EGF like domains 1
	OAZ2 Gene (Entity type)	ENSG00000180304 - ornithine decarboxylase antizyme 2

IGSF6

Gene (Entity type)

ENSG00000140749 - immunoglobulin superfamily member 6

LDLRAP1

Gene (Entity type)

ENSG00000157978 - low density lipoprotein receptor adaptor protein 1

PHC1

Gene (Entity type)

ENSG00000111752 - polyhomeotic homolog 1

ZMYM3

Gene (Entity type)

ENSG00000147130 - zinc finger MYM-type containing 3

PRKAG1

Gene (Entity type)

ENSG00000181929 - protein kinase AMP-activated non-catalytic subunit gamma 1

DMTN

Gene (Entity type)

ENSG00000158856 - dematin actin binding protein

ELP5

Gene (Entity type)

ENSG00000170291 - elongator acetyltransferase complex subunit 5

TRIM58

Gene (Entity type)

ENSG00000162722 - tripartite motif containing 58

TIE1

Gene (Entity type)

ENSG00000066056 - tyrosine kinase with immunoglobulin like and EGF like domains 1

OAZ2

Gene (Entity type)

ENSG00000180304 - ornithine decarboxylase antizyme 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.