CTSC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CTSC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CTSC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CTSC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CTSC Up.

Results found

Linked to

	Label	Description
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	PSMD4 Gene (Entity type)	ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4
	AGA Gene (Entity type)	ENSG00000038002 - aspartylglucosaminidase
	INTS6 Gene (Entity type)	ENSG00000102786 - integrator complex subunit 6
	NSL1 Gene (Entity type)	ENSG00000117697 - NSL1 component of MIS12 kinetochore complex
	SELENOF Gene (Entity type)	ENSG00000183291 - selenoprotein F
	TSNAX Gene (Entity type)	ENSG00000116918 - translin associated factor X
	ATF1 Gene (Entity type)	ENSG00000123268 - activating transcription factor 1
	FBXO3 Gene (Entity type)	ENSG00000110429 - F-box protein 3

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

PSMD4

Gene (Entity type)

ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4

AGA

Gene (Entity type)

ENSG00000038002 - aspartylglucosaminidase

INTS6

Gene (Entity type)

ENSG00000102786 - integrator complex subunit 6

NSL1

Gene (Entity type)

ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

SELENOF

Gene (Entity type)

ENSG00000183291 - selenoprotein F

TSNAX

Gene (Entity type)

ENSG00000116918 - translin associated factor X

ATF1

Gene (Entity type)

ENSG00000123268 - activating transcription factor 1

FBXO3

Gene (Entity type)

ENSG00000110429 - F-box protein 3

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.