TNC Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TNC Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TNC Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TNC Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TNC Down.

Results found

Linked to

	Label	Description
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	FAM8A1 Gene (Entity type)	ENSG00000137414 - family with sequence similarity 8 member A1
	CTSF Gene (Entity type)	ENSG00000174080 - cathepsin F
	THBS3 Gene (Entity type)	ENSG00000169231 - thrombospondin 3
	INTS6 Gene (Entity type)	ENSG00000102786 - integrator complex subunit 6
	ROGDI Gene (Entity type)	ENSG00000067836 - rogdi atypical leucine zipper
	CLCN7 Gene (Entity type)	ENSG00000103249 - Cl-/H+ antiporter 7
	VPS51 Gene (Entity type)	ENSG00000149823 - VPS51 subunit of GARP complex
	MGRN1 Gene (Entity type)	ENSG00000102858 - mahogunin ring finger 1

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

FAM8A1

Gene (Entity type)

ENSG00000137414 - family with sequence similarity 8 member A1

CTSF

Gene (Entity type)

ENSG00000174080 - cathepsin F

THBS3

Gene (Entity type)

ENSG00000169231 - thrombospondin 3

INTS6

Gene (Entity type)

ENSG00000102786 - integrator complex subunit 6

ROGDI

Gene (Entity type)

ENSG00000067836 - rogdi atypical leucine zipper

CLCN7

Gene (Entity type)

ENSG00000103249 - Cl-/H+ antiporter 7

VPS51

Gene (Entity type)

ENSG00000149823 - VPS51 subunit of GARP complex

MGRN1

Gene (Entity type)

ENSG00000102858 - mahogunin ring finger 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.