PTPN4 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPN4 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPN4 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPN4 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPN4 Down.

Results found

Linked to

	Label	Description
	MAEA Gene (Entity type)	ENSG00000090316 - macrophage erythroblast attacher, E3 ubiquitin ligase
	SLC2A2 Gene (Entity type)	ENSG00000163581 - solute carrier family 2 member 2
	AHDC1 Gene (Entity type)	ENSG00000126705 - AT-hook DNA binding motif containing 1
	NLGN4Y Gene (Entity type)	ENSG00000165246 - neuroligin 4 Y-linked
	WIPI2 Gene (Entity type)	ENSG00000157954 - WD repeat domain, phosphoinositide interacting 2
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	APOM Gene (Entity type)	ENSG00000204444 - apolipoprotein M
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	CDK5R1 Gene (Entity type)	ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1
	CAMK2G Gene (Entity type)	ENSG00000148660 - calcium/calmodulin dependent protein kinase II gamma

MAEA

Gene (Entity type)

ENSG00000090316 - macrophage erythroblast attacher, E3 ubiquitin ligase

SLC2A2

Gene (Entity type)

ENSG00000163581 - solute carrier family 2 member 2

AHDC1

Gene (Entity type)

ENSG00000126705 - AT-hook DNA binding motif containing 1

NLGN4Y

Gene (Entity type)

ENSG00000165246 - neuroligin 4 Y-linked

WIPI2

Gene (Entity type)

ENSG00000157954 - WD repeat domain, phosphoinositide interacting 2

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

APOM

Gene (Entity type)

ENSG00000204444 - apolipoprotein M

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

CDK5R1

Gene (Entity type)

ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1

CAMK2G

Gene (Entity type)

ENSG00000148660 - calcium/calmodulin dependent protein kinase II gamma

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.