PTPN4 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPN4 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPN4 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPN4 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPN4 Down.

Results found

Linked to

	Label	Description
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	CA3 Gene (Entity type)	ENSG00000164879 - carbonic anhydrase 3
	SUSD5 Gene (Entity type)	ENSG00000173705 - sushi domain containing 5
	FAM169A Gene (Entity type)	ENSG00000198780 - family with sequence similarity 169 member A
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	CAMK2G Gene (Entity type)	ENSG00000148660 - calcium/calmodulin dependent protein kinase II gamma
	CDK5R1 Gene (Entity type)	ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1
	WIPI2 Gene (Entity type)	ENSG00000157954 - WD repeat domain, phosphoinositide interacting 2

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

CA3

Gene (Entity type)

ENSG00000164879 - carbonic anhydrase 3

SUSD5

Gene (Entity type)

ENSG00000173705 - sushi domain containing 5

FAM169A

Gene (Entity type)

ENSG00000198780 - family with sequence similarity 169 member A

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

CAMK2G

Gene (Entity type)

ENSG00000148660 - calcium/calmodulin dependent protein kinase II gamma

CDK5R1

Gene (Entity type)

ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1

WIPI2

Gene (Entity type)

ENSG00000157954 - WD repeat domain, phosphoinositide interacting 2

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.