SMS Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SMS Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SMS Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SMS Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SMS Down.

Results found

Linked to

	Label	Description
	TRIM9 Gene (Entity type)	ENSG00000100505 - tripartite motif containing 9
	CACNA1A Gene (Entity type)	ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	INPP4A Gene (Entity type)	ENSG00000040933 - inositol polyphosphate-4-phosphatase type I A
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2
	B3GALNT1 Gene (Entity type)	ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)
	CBR4 Gene (Entity type)	ENSG00000145439 - carbonyl reductase 4
	GNA14 Gene (Entity type)	ENSG00000156049 - G protein subunit alpha 14
	HDHD5 Gene (Entity type)	ENSG00000069998 - haloacid dehalogenase like hydrolase domain containing 5
	NLGN1 Gene (Entity type)	ENSG00000169760 - neuroligin 1

TRIM9

Gene (Entity type)

ENSG00000100505 - tripartite motif containing 9

CACNA1A

Gene (Entity type)

ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

INPP4A

Gene (Entity type)

ENSG00000040933 - inositol polyphosphate-4-phosphatase type I A

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

B3GALNT1

Gene (Entity type)

ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)

CBR4

Gene (Entity type)

ENSG00000145439 - carbonyl reductase 4

GNA14

Gene (Entity type)

ENSG00000156049 - G protein subunit alpha 14

HDHD5

Gene (Entity type)

ENSG00000069998 - haloacid dehalogenase like hydrolase domain containing 5

NLGN1

Gene (Entity type)

ENSG00000169760 - neuroligin 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.