CALCA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CALCA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CALCA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CALCA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CALCA Up.

Results found

Linked to

	Label	Description
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	HPGDS Gene (Entity type)	ENSG00000163106 - hematopoietic prostaglandin D synthase
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	LRRC1 Gene (Entity type)	ENSG00000137269 - leucine rich repeat containing 1
	CBR4 Gene (Entity type)	ENSG00000145439 - carbonyl reductase 4
	TMEM168 Gene (Entity type)	ENSG00000146802 - transmembrane protein 168
	STATH Gene (Entity type)	ENSG00000126549 - statherin
	DPH5 Gene (Entity type)	ENSG00000117543 - diphthamide biosynthesis 5
	ZSCAN31 Gene (Entity type)	ENSG00000235109 - zinc finger and SCAN domain containing 31
	SH3GL3 Gene (Entity type)	ENSG00000140600 - SH3 domain containing GRB2 like 3, endophilin A3

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

HPGDS

Gene (Entity type)

ENSG00000163106 - hematopoietic prostaglandin D synthase

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

LRRC1

Gene (Entity type)

ENSG00000137269 - leucine rich repeat containing 1

CBR4

Gene (Entity type)

ENSG00000145439 - carbonyl reductase 4

TMEM168

Gene (Entity type)

ENSG00000146802 - transmembrane protein 168

STATH

Gene (Entity type)

ENSG00000126549 - statherin

DPH5

Gene (Entity type)

ENSG00000117543 - diphthamide biosynthesis 5

ZSCAN31

Gene (Entity type)

ENSG00000235109 - zinc finger and SCAN domain containing 31

SH3GL3

Gene (Entity type)

ENSG00000140600 - SH3 domain containing GRB2 like 3, endophilin A3

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.