ITM2A Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ITM2A Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ITM2A Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ITM2A Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ITM2A Up.

Results found

Linked to

	Label	Description
	ACBD3 Gene (Entity type)	ENSG00000182827 - acyl-CoA binding domain containing 3
	ATP6V1E1 Gene (Entity type)	ENSG00000131100 - ATPase H+ transporting V1 subunit E1
	TTC17 Gene (Entity type)	ENSG00000052841 - tetratricopeptide repeat domain 17
	ANKS1A Gene (Entity type)	ENSG00000064999 - ankyrin repeat and sterile alpha motif domain containing 1A
	ATF7IP Gene (Entity type)	ENSG00000171681 - activating transcription factor 7 interacting protein
	TUG1 Gene (Entity type)	ENSG00000253352 - taurine up-regulated 1
	PSPC1 Gene (Entity type)	ENSG00000121390 - paraspeckle component 1
	SNX13 Gene (Entity type)	ENSG00000071189 - sorting nexin 13
	RNF10 Gene (Entity type)	ENSG00000022840 - ring finger protein 10
	MARF1 Gene (Entity type)	ENSG00000166783 - meiosis regulator and mRNA stability factor 1

ACBD3

Gene (Entity type)

ENSG00000182827 - acyl-CoA binding domain containing 3

ATP6V1E1

Gene (Entity type)

ENSG00000131100 - ATPase H+ transporting V1 subunit E1

TTC17

Gene (Entity type)

ENSG00000052841 - tetratricopeptide repeat domain 17

ANKS1A

Gene (Entity type)

ENSG00000064999 - ankyrin repeat and sterile alpha motif domain containing 1A

ATF7IP

Gene (Entity type)

ENSG00000171681 - activating transcription factor 7 interacting protein

TUG1

Gene (Entity type)

ENSG00000253352 - taurine up-regulated 1

PSPC1

Gene (Entity type)

ENSG00000121390 - paraspeckle component 1

SNX13

Gene (Entity type)

ENSG00000071189 - sorting nexin 13

RNF10

Gene (Entity type)

ENSG00000022840 - ring finger protein 10

MARF1

Gene (Entity type)

ENSG00000166783 - meiosis regulator and mRNA stability factor 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.