GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 8 v 5 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_8_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_8_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_8_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_8_v_5_human_up.

Results found

Linked to

	Label	Description
	RPS18 Gene (Entity type)	ribosomal protein S18
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	GAS5 Gene (Entity type)	growth arrest specific 5
	DANCR Gene (Entity type)	differentiation antagonizing non-protein coding RNA
	SNHG3 Gene (Entity type)	small nucleolar RNA host gene 3
	SNHG4 Gene (Entity type)	small nucleolar RNA host gene 4
	PVT1 Gene (Entity type)	Pvt1 oncogene
	H3-7 Gene (Entity type)	H3.7 histone (putative)
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	C19orf48P Gene (Entity type)	multidrug resistance-related protein

RPS18

Gene (Entity type)

ribosomal protein S18

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

GAS5

Gene (Entity type)

growth arrest specific 5

DANCR

Gene (Entity type)

differentiation antagonizing non-protein coding RNA

SNHG3

Gene (Entity type)

small nucleolar RNA host gene 3

SNHG4

Gene (Entity type)

small nucleolar RNA host gene 4

PVT1

Gene (Entity type)

Pvt1 oncogene

H3-7

Gene (Entity type)

H3.7 histone (putative)

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

C19orf48P

Gene (Entity type)

multidrug resistance-related protein

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.