GYPA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GYPA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GYPA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GYPA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GYPA Up.

Results found

Linked to

	Label	Description
	SNRK Gene (Entity type)	ENSG00000163788 - SNF related kinase
	PSMC2 Gene (Entity type)	ENSG00000161057 - proteasome 26S subunit, ATPase 2
	LEP Gene (Entity type)	ENSG00000174697 - leptin
	MRPL33 Gene (Entity type)	ENSG00000243147 - mitochondrial ribosomal protein L33
	ARPC1A Gene (Entity type)	ENSG00000241685 - actin related protein 2/3 complex subunit 1A
	SEMA3G Gene (Entity type)	ENSG00000010319 - semaphorin 3G
	RNF7 Gene (Entity type)	ENSG00000114125 - ring finger protein 7
	POLR2J Gene (Entity type)	ENSG00000005075 - RNA polymerase II subunit J
	LSM8 Gene (Entity type)	ENSG00000128534 - LSM8 homolog, U6 small nuclear RNA associated
	MOB4 Gene (Entity type)	ENSG00000115540 - MOB family member 4, phocein

SNRK

Gene (Entity type)

ENSG00000163788 - SNF related kinase

PSMC2

Gene (Entity type)

ENSG00000161057 - proteasome 26S subunit, ATPase 2

LEP

Gene (Entity type)

ENSG00000174697 - leptin

MRPL33

Gene (Entity type)

ENSG00000243147 - mitochondrial ribosomal protein L33

ARPC1A

Gene (Entity type)

ENSG00000241685 - actin related protein 2/3 complex subunit 1A

SEMA3G

Gene (Entity type)

ENSG00000010319 - semaphorin 3G

RNF7

Gene (Entity type)

ENSG00000114125 - ring finger protein 7

POLR2J

Gene (Entity type)

ENSG00000005075 - RNA polymerase II subunit J

LSM8

Gene (Entity type)

ENSG00000128534 - LSM8 homolog, U6 small nuclear RNA associated

MOB4

Gene (Entity type)

ENSG00000115540 - MOB family member 4, phocein

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.