PRKDC Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PRKDC Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PRKDC Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PRKDC Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PRKDC Down.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	MNS1 Gene (Entity type)	ENSG00000138587 - meiosis specific nuclear structural 1
	PDSS1 Gene (Entity type)	ENSG00000148459 - decaprenyl diphosphate synthase subunit 1
	CR2 Gene (Entity type)	ENSG00000117322 - complement C3d receptor 2
	ATP2C1 Gene (Entity type)	ENSG00000017260 - ATPase secretory pathway Ca2+ transporting 1
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated
	EXTL2 Gene (Entity type)	ENSG00000162694 - exostosin like glycosyltransferase 2
	EHHADH Gene (Entity type)	ENSG00000113790 - enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase
	NOC3L Gene (Entity type)	ENSG00000173145 - NOC3 like DNA replication regulator
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

MNS1

Gene (Entity type)

ENSG00000138587 - meiosis specific nuclear structural 1

PDSS1

Gene (Entity type)

ENSG00000148459 - decaprenyl diphosphate synthase subunit 1

CR2

Gene (Entity type)

ENSG00000117322 - complement C3d receptor 2

ATP2C1

Gene (Entity type)

ENSG00000017260 - ATPase secretory pathway Ca2+ transporting 1

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

EXTL2

Gene (Entity type)

ENSG00000162694 - exostosin like glycosyltransferase 2

EHHADH

Gene (Entity type)

ENSG00000113790 - enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase

NOC3L

Gene (Entity type)

ENSG00000173145 - NOC3 like DNA replication regulator

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.