GCK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GCK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GCK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GCK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GCK Down.

Results found

Linked to

	Label	Description
	ITSN2 Gene (Entity type)	ENSG00000198399 - intersectin 2
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	TRIP12 Gene (Entity type)	ENSG00000153827 - thyroid hormone receptor interactor 12
	ATF7IP Gene (Entity type)	ENSG00000171681 - activating transcription factor 7 interacting protein
	UFC1 Gene (Entity type)	ENSG00000143222 - ubiquitin-fold modifier conjugating enzyme 1
	PCBD1 Gene (Entity type)	ENSG00000166228 - pterin-4 alpha-carbinolamine dehydratase 1
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	KHNYN Gene (Entity type)	ENSG00000100441 - KH and NYN domain containing
	STX4 Gene (Entity type)	ENSG00000103496 - syntaxin 4
	CNPY2 Gene (Entity type)	ENSG00000257727 - canopy FGF signaling regulator 2

ITSN2

Gene (Entity type)

ENSG00000198399 - intersectin 2

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

TRIP12

Gene (Entity type)

ENSG00000153827 - thyroid hormone receptor interactor 12

ATF7IP

Gene (Entity type)

ENSG00000171681 - activating transcription factor 7 interacting protein

UFC1

Gene (Entity type)

ENSG00000143222 - ubiquitin-fold modifier conjugating enzyme 1

PCBD1

Gene (Entity type)

ENSG00000166228 - pterin-4 alpha-carbinolamine dehydratase 1

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

KHNYN

Gene (Entity type)

ENSG00000100441 - KH and NYN domain containing

STX4

Gene (Entity type)

ENSG00000103496 - syntaxin 4

CNPY2

Gene (Entity type)

ENSG00000257727 - canopy FGF signaling regulator 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.