CD3G Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CD3G Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CD3G Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CD3G Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CD3G Down.

Results found

Linked to

	Label	Description
	SNX13 Gene (Entity type)	ENSG00000071189 - sorting nexin 13
	NAXD Gene (Entity type)	ENSG00000213995 - NAD(P)HX dehydratase
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	SNRPA1 Gene (Entity type)	ENSG00000131876 - small nuclear ribonucleoprotein polypeptide A'
	ARGLU1 Gene (Entity type)	ENSG00000134884 - arginine and glutamate rich 1
	RUFY2 Gene (Entity type)	ENSG00000204130 - RUN and FYVE domain containing 2
	STAG3 Gene (Entity type)	ENSG00000066923 - STAG3 cohesin complex component
	NKTR Gene (Entity type)	ENSG00000114857 - natural killer cell triggering receptor
	EDRF1 Gene (Entity type)	ENSG00000107938 - erythroid differentiation regulatory factor 1

SNX13

Gene (Entity type)

ENSG00000071189 - sorting nexin 13

NAXD

Gene (Entity type)

ENSG00000213995 - NAD(P)HX dehydratase

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

SNRPA1

Gene (Entity type)

ENSG00000131876 - small nuclear ribonucleoprotein polypeptide A'

ARGLU1

Gene (Entity type)

ENSG00000134884 - arginine and glutamate rich 1

RUFY2

Gene (Entity type)

ENSG00000204130 - RUN and FYVE domain containing 2

STAG3

Gene (Entity type)

ENSG00000066923 - STAG3 cohesin complex component

NKTR

Gene (Entity type)

ENSG00000114857 - natural killer cell triggering receptor

EDRF1

Gene (Entity type)

ENSG00000107938 - erythroid differentiation regulatory factor 1

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.