PTGER2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTGER2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTGER2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTGER2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTGER2 Up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	DCAF10 Gene (Entity type)	ENSG00000122741 - DDB1 and CUL4 associated factor 10
	GHR Gene (Entity type)	ENSG00000112964 - growth hormone receptor
	MLC1 Gene (Entity type)	ENSG00000100427 - modulator of VRAC current 1
	YEATS4 Gene (Entity type)	ENSG00000127337 - YEATS domain containing 4
	SIVA1 Gene (Entity type)	ENSG00000184990 - SIVA1 apoptosis inducing factor
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9
	CTBP1 Gene (Entity type)	ENSG00000159692 - C-terminal binding protein 1
	RNF5 Gene (Entity type)	ENSG00000204308 - ring finger protein 5

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

DCAF10

Gene (Entity type)

ENSG00000122741 - DDB1 and CUL4 associated factor 10

GHR

Gene (Entity type)

ENSG00000112964 - growth hormone receptor

MLC1

Gene (Entity type)

ENSG00000100427 - modulator of VRAC current 1

YEATS4

Gene (Entity type)

ENSG00000127337 - YEATS domain containing 4

SIVA1

Gene (Entity type)

ENSG00000184990 - SIVA1 apoptosis inducing factor

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

CTBP1

Gene (Entity type)

ENSG00000159692 - C-terminal binding protein 1

RNF5

Gene (Entity type)

ENSG00000204308 - ring finger protein 5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.