GSE139540 menadione 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540_menadione_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540_menadione_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540_menadione_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540_menadione_3_v_1_human_up.

Results found

Linked to

	Label	Description
	LINC-PINT Gene (Entity type)	long intergenic non-protein coding RNA, p53 induced transcript
	MSANTD7 Gene (Entity type)	Myb/SANT DNA binding domain containing 7
	EBLN3P Gene (Entity type)	endogenous Bornavirus like nucleoprotein 3, pseudogene
	PARD6G-AS1 Gene (Entity type)	PARD6G antisense RNA 1
	LOC117779438 Gene (Entity type)	uncharacterized LOC117779438
	LINC02363 Gene (Entity type)	long intergenic non-protein coding RNA 2363
	LOC105372703 Gene (Entity type)	uncharacterized LOC105372703
	HSPA8P4 Gene (Entity type)	heat shock protein family A (Hsp70) member 8 pseudogene 4
	C3P1 Gene (Entity type)	complement 3 precursor pseudogene
	LOC105373696 Gene (Entity type)	uncharacterized LOC105373696

LINC-PINT

Gene (Entity type)

long intergenic non-protein coding RNA, p53 induced transcript

MSANTD7

Gene (Entity type)

Myb/SANT DNA binding domain containing 7

EBLN3P

Gene (Entity type)

endogenous Bornavirus like nucleoprotein 3, pseudogene

PARD6G-AS1

Gene (Entity type)

PARD6G antisense RNA 1

LOC117779438

Gene (Entity type)

uncharacterized LOC117779438

LINC02363

Gene (Entity type)

long intergenic non-protein coding RNA 2363

LOC105372703

Gene (Entity type)

uncharacterized LOC105372703

HSPA8P4

Gene (Entity type)

heat shock protein family A (Hsp70) member 8 pseudogene 4

C3P1

Gene (Entity type)

complement 3 precursor pseudogene

LOC105373696

Gene (Entity type)

uncharacterized LOC105373696

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.