NLK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NLK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NLK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NLK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NLK Down.

Results found

Linked to

	Label	Description
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	MRPL40 Gene (Entity type)	ENSG00000185608 - mitochondrial ribosomal protein L40
	BUD31 Gene (Entity type)	ENSG00000106245 - BUD31 spliceosome associated protein
	NOP2 Gene (Entity type)	ENSG00000111641 - NOP2 nucleolar protein
	BUD23 Gene (Entity type)	ENSG00000071462 - BUD23 rRNA methyltransferase and ribosome maturation factor
	POGK Gene (Entity type)	ENSG00000143157 - pogo transposable element derived with KRAB domain
	ABHD11 Gene (Entity type)	ENSG00000106077 - abhydrolase domain containing 11
	TBL2 Gene (Entity type)	ENSG00000106638 - transducin beta like 2

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

MRPL40

Gene (Entity type)

ENSG00000185608 - mitochondrial ribosomal protein L40

BUD31

Gene (Entity type)

ENSG00000106245 - BUD31 spliceosome associated protein

NOP2

Gene (Entity type)

ENSG00000111641 - NOP2 nucleolar protein

BUD23

Gene (Entity type)

ENSG00000071462 - BUD23 rRNA methyltransferase and ribosome maturation factor

POGK

Gene (Entity type)

ENSG00000143157 - pogo transposable element derived with KRAB domain

ABHD11

Gene (Entity type)

ENSG00000106077 - abhydrolase domain containing 11

TBL2

Gene (Entity type)

ENSG00000106638 - transducin beta like 2

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.