GSE186486 SF3B1 DDX42 overexpression HEK293T 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE186486_SF3B1_DDX42 overexpression_HEK293T_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE186486_SF3B1_DDX42 overexpression_HEK293T_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE186486_SF3B1_DDX42 overexpression_HEK293T_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE186486_SF3B1_DDX42 overexpression_HEK293T_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	MIR99AHG Gene (Entity type)	ENSG00000215386 - mir-99a-let-7c cluster host gene
	JPX Gene (Entity type)	ENSG00000225470 - JPX transcript, XIST activator
	LOC101927164 Gene (Entity type)	ENSG00000237101 - uncharacterized LOC101927164
	RPL36AP21 Gene (Entity type)	ENSG00000240785 - ribosomal protein L36a pseudogene 21
	TAS2R12P Gene (Entity type)	ENSG00000256682 - taste 2 receptor member 12, pseudogene
	MTND5P42 Gene (Entity type)	ENSG00000283578 - MT-ND5 pseudogene 42
	CUBNP3 Gene (Entity type)	ENSG00000235690 - cubilin pseudogene 3
	RNU1-75P Gene (Entity type)	ENSG00000194297 - RNA, U1 small nuclear 75, pseudogene
	SGO1 Gene (Entity type)	ENSG00000129810 - shugoshin 1
	MBTD1 Gene (Entity type)	ENSG00000011258 - mbt domain containing 1

MIR99AHG

Gene (Entity type)

ENSG00000215386 - mir-99a-let-7c cluster host gene

JPX

Gene (Entity type)

ENSG00000225470 - JPX transcript, XIST activator

LOC101927164

Gene (Entity type)

ENSG00000237101 - uncharacterized LOC101927164

RPL36AP21

Gene (Entity type)

ENSG00000240785 - ribosomal protein L36a pseudogene 21

TAS2R12P

Gene (Entity type)

ENSG00000256682 - taste 2 receptor member 12, pseudogene

MTND5P42

Gene (Entity type)

ENSG00000283578 - MT-ND5 pseudogene 42

CUBNP3

Gene (Entity type)

ENSG00000235690 - cubilin pseudogene 3

RNU1-75P

Gene (Entity type)

ENSG00000194297 - RNA, U1 small nuclear 75, pseudogene

SGO1

Gene (Entity type)

ENSG00000129810 - shugoshin 1

MBTD1

Gene (Entity type)

ENSG00000011258 - mbt domain containing 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.