NBN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NBN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NBN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NBN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NBN Up.

Results found

Linked to

	Label	Description
	YEATS4 Gene (Entity type)	ENSG00000127337 - YEATS domain containing 4
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	JAKMIP2 Gene (Entity type)	ENSG00000176049 - janus kinase and microtubule interacting protein 2
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	VEGFD Gene (Entity type)	ENSG00000165197 - vascular endothelial growth factor D
	IER3IP1 Gene (Entity type)	ENSG00000134049 - immediate early response 3 interacting protein 1
	SMU1 Gene (Entity type)	ENSG00000122692 - SMU1 DNA replication regulator and spliceosomal factor
	KCTD20 Gene (Entity type)	ENSG00000112078 - potassium channel tetramerization domain containing 20
	MAPK14 Gene (Entity type)	ENSG00000112062 - mitogen-activated protein kinase 14
	TLR5 Gene (Entity type)	ENSG00000187554 - toll like receptor 5

YEATS4

Gene (Entity type)

ENSG00000127337 - YEATS domain containing 4

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

JAKMIP2

Gene (Entity type)

ENSG00000176049 - janus kinase and microtubule interacting protein 2

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

VEGFD

Gene (Entity type)

ENSG00000165197 - vascular endothelial growth factor D

IER3IP1

Gene (Entity type)

ENSG00000134049 - immediate early response 3 interacting protein 1

SMU1

Gene (Entity type)

ENSG00000122692 - SMU1 DNA replication regulator and spliceosomal factor

KCTD20

Gene (Entity type)

ENSG00000112078 - potassium channel tetramerization domain containing 20

MAPK14

Gene (Entity type)

ENSG00000112062 - mitogen-activated protein kinase 14

TLR5

Gene (Entity type)

ENSG00000187554 - toll like receptor 5

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.