GSE130482 TGM2 knockdown SW480 HCT 116 2 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

Results found

Linked to

	Label	Description
	ARHGAP44 Gene (Entity type)	ENSG00000006740 - Rho GTPase activating protein 44
	CLIP4 Gene (Entity type)	ENSG00000115295 - CAP-Gly domain containing linker protein family member 4
	TUBB4A Gene (Entity type)	ENSG00000104833 - tubulin beta 4A class IVa
	PTPRS Gene (Entity type)	ENSG00000105426 - protein tyrosine phosphatase receptor type S
	CACNA1A Gene (Entity type)	ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A
	ZNF365 Gene (Entity type)	ENSG00000138311 - zinc finger protein 365
	GLIPR2 Gene (Entity type)	ENSG00000122694 - GLI pathogenesis related 2
	ZNF618 Gene (Entity type)	ENSG00000157657 - zinc finger protein 618
	MACROH2A2 Gene (Entity type)	ENSG00000099284 - macroH2A.2 histone
	POLR1E Gene (Entity type)	ENSG00000137054 - RNA polymerase I subunit E

ARHGAP44

Gene (Entity type)

ENSG00000006740 - Rho GTPase activating protein 44

CLIP4

Gene (Entity type)

ENSG00000115295 - CAP-Gly domain containing linker protein family member 4

TUBB4A

Gene (Entity type)

ENSG00000104833 - tubulin beta 4A class IVa

PTPRS

Gene (Entity type)

ENSG00000105426 - protein tyrosine phosphatase receptor type S

CACNA1A

Gene (Entity type)

ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A

ZNF365

Gene (Entity type)

ENSG00000138311 - zinc finger protein 365

GLIPR2

Gene (Entity type)

ENSG00000122694 - GLI pathogenesis related 2

ZNF618

Gene (Entity type)

ENSG00000157657 - zinc finger protein 618

MACROH2A2

Gene (Entity type)

ENSG00000099284 - macroH2A.2 histone

POLR1E

Gene (Entity type)

ENSG00000137054 - RNA polymerase I subunit E

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.