GSE130482 TGM2 knockdown SW480 HCT 116 2 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_1_human_up.

Results found

Linked to

	Label	Description
	H2AC11 Gene (Entity type)	H2A clustered histone 11
	H2AC19 Gene (Entity type)	H2A clustered histone 19
	CYTOR Gene (Entity type)	cytoskeleton regulator RNA
	RPS2P5 Gene (Entity type)	ribosomal protein S2 pseudogene 5
	LOC339260 Gene (Entity type)	uncharacterized LOC339260
	NR2F1-AS1 Gene (Entity type)	NR2F1 regulatory antisense RNA 1
	FIRRE Gene (Entity type)	firre intergenic repeating RNA element
	MIR663AHG Gene (Entity type)	MIR663A host gene
	CNTNAP3C Gene (Entity type)	contactin associated protein family member 3C
	FEZF1-AS1 Gene (Entity type)	FEZF1 antisense RNA 1

H2AC11

Gene (Entity type)

H2A clustered histone 11

H2AC19

Gene (Entity type)

H2A clustered histone 19

CYTOR

Gene (Entity type)

cytoskeleton regulator RNA

RPS2P5

Gene (Entity type)

ribosomal protein S2 pseudogene 5

LOC339260

Gene (Entity type)

uncharacterized LOC339260

NR2F1-AS1

Gene (Entity type)

NR2F1 regulatory antisense RNA 1

FIRRE

Gene (Entity type)

firre intergenic repeating RNA element

MIR663AHG

Gene (Entity type)

MIR663A host gene

CNTNAP3C

Gene (Entity type)

contactin associated protein family member 3C

FEZF1-AS1

Gene (Entity type)

FEZF1 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.