ME3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ME3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ME3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ME3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ME3 Up.

Results found

Linked to

	Label	Description
	ASMTL Gene (Entity type)	ENSG00000292339 - acetylserotonin O-methyltransferase like
	EFCAB11 Gene (Entity type)	ENSG00000140025 - EF-hand calcium binding domain 11
	IFT74 Gene (Entity type)	ENSG00000096872 - intraflagellar transport 74
	CNTNAP1 Gene (Entity type)	ENSG00000108797 - contactin associated protein 1
	NOL4 Gene (Entity type)	ENSG00000101746 - nucleolar protein 4
	TMBIM4 Gene (Entity type)	ENSG00000155957 - transmembrane BAX inhibitor motif containing 4
	CTNNA2 Gene (Entity type)	ENSG00000066032 - catenin alpha 2
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	ZFC3H1 Gene (Entity type)	ENSG00000133858 - zinc finger C3H1-type containing
	VPS13A Gene (Entity type)	ENSG00000197969 - vacuolar protein sorting 13 homolog A

ASMTL

Gene (Entity type)

ENSG00000292339 - acetylserotonin O-methyltransferase like

EFCAB11

Gene (Entity type)

ENSG00000140025 - EF-hand calcium binding domain 11

IFT74

Gene (Entity type)

ENSG00000096872 - intraflagellar transport 74

CNTNAP1

Gene (Entity type)

ENSG00000108797 - contactin associated protein 1

NOL4

Gene (Entity type)

ENSG00000101746 - nucleolar protein 4

TMBIM4

Gene (Entity type)

ENSG00000155957 - transmembrane BAX inhibitor motif containing 4

CTNNA2

Gene (Entity type)

ENSG00000066032 - catenin alpha 2

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

ZFC3H1

Gene (Entity type)

ENSG00000133858 - zinc finger C3H1-type containing

VPS13A

Gene (Entity type)

ENSG00000197969 - vacuolar protein sorting 13 homolog A

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.