GSE217776 GSE217829 MLL SGF29 CSNK2A1 knockout U-937 4 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	LPAR2 Gene (Entity type)	ENSG00000064547 - lysophosphatidic acid receptor 2
	UQCR11 Gene (Entity type)	ENSG00000127540 - ubiquinol-cytochrome c reductase, complex III subunit XI
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3
	BAZ1B Gene (Entity type)	ENSG00000009954 - bromodomain adjacent to zinc finger domain 1B
	NOSIP Gene (Entity type)	ENSG00000142546 - nitric oxide synthase interacting protein
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor
	PRKAR2A Gene (Entity type)	ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

LPAR2

Gene (Entity type)

ENSG00000064547 - lysophosphatidic acid receptor 2

UQCR11

Gene (Entity type)

ENSG00000127540 - ubiquinol-cytochrome c reductase, complex III subunit XI

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

BAZ1B

Gene (Entity type)

ENSG00000009954 - bromodomain adjacent to zinc finger domain 1B

NOSIP

Gene (Entity type)

ENSG00000142546 - nitric oxide synthase interacting protein

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

PRKAR2A

Gene (Entity type)

ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.