ITPKC Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ITPKC Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ITPKC Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ITPKC Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ITPKC Down.

Results found

Linked to

	Label	Description
	PAFAH1B3 Gene (Entity type)	ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3
	PIGB Gene (Entity type)	ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	ARHGAP44 Gene (Entity type)	ENSG00000006740 - Rho GTPase activating protein 44
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	DDX11 Gene (Entity type)	ENSG00000013573 - DEAD/H-box helicase 11
	TFCP2L1 Gene (Entity type)	ENSG00000115112 - transcription factor CP2 like 1
	XRCC2 Gene (Entity type)	ENSG00000196584 - X-ray repair cross complementing 2
	DIP2A Gene (Entity type)	ENSG00000160305 - DIP2 acetate--CoA ligase A
	SNRPA Gene (Entity type)	ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A

PAFAH1B3

Gene (Entity type)

ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3

PIGB

Gene (Entity type)

ENSG00000069943 - phosphatidylinositol glycan anchor biosynthesis class B

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

ARHGAP44

Gene (Entity type)

ENSG00000006740 - Rho GTPase activating protein 44

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

DDX11

Gene (Entity type)

ENSG00000013573 - DEAD/H-box helicase 11

TFCP2L1

Gene (Entity type)

ENSG00000115112 - transcription factor CP2 like 1

XRCC2

Gene (Entity type)

ENSG00000196584 - X-ray repair cross complementing 2

DIP2A

Gene (Entity type)

ENSG00000160305 - DIP2 acetate--CoA ligase A

SNRPA

Gene (Entity type)

ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.