RUNX2 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RUNX2 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RUNX2 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RUNX2 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RUNX2 Down.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	TMEM41B Gene (Entity type)	ENSG00000166471 - transmembrane protein 41B
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	GOLPH3L Gene (Entity type)	ENSG00000143457 - golgi phosphoprotein 3 like
	CREBBP Gene (Entity type)	ENSG00000005339 - CREB binding lysine acetyltransferase
	LUZP1 Gene (Entity type)	ENSG00000169641 - leucine zipper protein 1
	ELOB Gene (Entity type)	ENSG00000103363 - elongin B
	ING3 Gene (Entity type)	ENSG00000071243 - inhibitor of growth family member 3
	METTL5 Gene (Entity type)	ENSG00000138382 - methyltransferase 5, N6-adenosine

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

TMEM41B

Gene (Entity type)

ENSG00000166471 - transmembrane protein 41B

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

GOLPH3L

Gene (Entity type)

ENSG00000143457 - golgi phosphoprotein 3 like

CREBBP

Gene (Entity type)

ENSG00000005339 - CREB binding lysine acetyltransferase

LUZP1

Gene (Entity type)

ENSG00000169641 - leucine zipper protein 1

ELOB

Gene (Entity type)

ENSG00000103363 - elongin B

ING3

Gene (Entity type)

ENSG00000071243 - inhibitor of growth family member 3

METTL5

Gene (Entity type)

ENSG00000138382 - methyltransferase 5, N6-adenosine

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.