GPNMB Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPNMB Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPNMB Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPNMB Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPNMB Down.

Results found

Linked to

	Label	Description
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	COX7A2 Gene (Entity type)	ENSG00000112695 - cytochrome c oxidase subunit 7A2
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	IL20RA Gene (Entity type)	ENSG00000016402 - interleukin 20 receptor subunit alpha
	COX17 Gene (Entity type)	ENSG00000138495 - cytochrome c oxidase copper chaperone COX17
	NIT2 Gene (Entity type)	ENSG00000114021 - nitrilase family member 2
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f
	UQCRQ Gene (Entity type)	ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII
	NDUFB2 Gene (Entity type)	ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

COX7A2

Gene (Entity type)

ENSG00000112695 - cytochrome c oxidase subunit 7A2

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

IL20RA

Gene (Entity type)

ENSG00000016402 - interleukin 20 receptor subunit alpha

COX17

Gene (Entity type)

ENSG00000138495 - cytochrome c oxidase copper chaperone COX17

NIT2

Gene (Entity type)

ENSG00000114021 - nitrilase family member 2

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

UQCRQ

Gene (Entity type)

ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII

NDUFB2

Gene (Entity type)

ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.