GSE138219 ROS knockdown 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE138219_ROS knockdown_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE138219_ROS knockdown_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE138219_ROS knockdown_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE138219_ROS knockdown_0_v_1_human_up.

Results found

Linked to

	Label	Description
	DFFA Gene (Entity type)	ENSG00000160049 - DNA fragmentation factor subunit alpha
	SLC22A5 Gene (Entity type)	ENSG00000197375 - solute carrier family 22 member 5
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	PRPS1 Gene (Entity type)	ENSG00000147224 - phosphoribosyl pyrophosphate synthetase 1
	PIP5K1A Gene (Entity type)	ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
	KDM6B Gene (Entity type)	ENSG00000132510 - lysine demethylase 6B
	MED1 Gene (Entity type)	ENSG00000125686 - mediator complex subunit 1
	UTP18 Gene (Entity type)	ENSG00000011260 - UTP18 small subunit processome component

DFFA

Gene (Entity type)

ENSG00000160049 - DNA fragmentation factor subunit alpha

SLC22A5

Gene (Entity type)

ENSG00000197375 - solute carrier family 22 member 5

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

PRPS1

Gene (Entity type)

ENSG00000147224 - phosphoribosyl pyrophosphate synthetase 1

PIP5K1A

Gene (Entity type)

ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha

KDM6B

Gene (Entity type)

ENSG00000132510 - lysine demethylase 6B

MED1

Gene (Entity type)

ENSG00000125686 - mediator complex subunit 1

UTP18

Gene (Entity type)

ENSG00000011260 - UTP18 small subunit processome component

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.